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[Bra00]

G. Bradski. The OpenCV Library. Dr. Dobb's Journal of Software Tools, 2000.

[BWR+19]

Jesse E. Bucksot, Andrew J. Wells, Kimiya C. Rahebi, Vishnoukumaar Sivaji, Mario Romero-Ortega, Michael P. Kilgard, Robert L. Rennaker, and Seth A. Hays. Flat electrode contacts for vagus nerve stimulation. PLOS ONE, 14(11):e0215191, November 2019. URL: https://doi.org/10.1371/journal.pone.0215191, doi:10.1371/journal.pone.0215191.

[CR11]

William D Callister and David G Rethwisch. Fundamentals of materials science and engineering an integrated approach 4E. John Wiley & Sons, Nashville, TN, December 2011.

[C+--]

Maxime Chalton and others. Pyclipper. 2015–. URL: https://github.com/fonttools/pyclipper.

[Cla15]

Alex Clark. Pillow (pil fork) documentation. 2015. URL: https://buildmedia.readthedocs.org/media/pdf/pillow/latest/pillow.pdf.

[dAlcantaraSF08]

Adriana Cristina Licursi de Alcântara, Helio Cesar Salgado, and Valéria Paula Sassoli Fazan. Morphology and morphometry of the vagus nerve in male and female spontaneously hypertensive rats. Brain Research, 1197:170–180, March 2008. URL: https://doi.org/10.1016/j.brainres.2007.12.045, doi:10.1016/j.brainres.2007.12.045.

[dP97]

Michael de Podesta. Understanding the properties of matter. Routledge, London, England, January 1997.

[FSB97]

Valéria PS Fazan, Helio C Salgado, and Amilton A Barreira. A descriptive and quantitative light and electron microscopy study of the aortic depressor nerve in normotensive rats. Hypertension, 30(3):693–698, 1997. URL: https://doi.org/10.1161/01.HYP.30.3.693, doi:10.1161/01.hyp.30.3.693.

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[GC--]

Eric Gazoni and Charlie Clark. Openpyxl - a python library to read/write excel 2010 xlsx/xlsm files. 2020–. URL: https://openpyxl.readthedocs.io.

[GB67]

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[GJB84]

F. L. H. Gielen, W. Wallinga-de Jonge, and K. L. Boon. Electrical conductivity of skeletal muscle tissue: experimental results from different musclesin vivo. Medical &amp$\mathsemicolon $ Biological Engineering &amp$\mathsemicolon $ Computing, 22(6):569–577, November 1984. URL: https://doi.org/10.1007/bf02443872, doi:10.1007/bf02443872.

[G+--]

Sean Gillies and others. Shapely: manipulation and analysis of geometric objects. 2007–. URL: https://github.com/Toblerity/Shapely.

[GM94]

Warren M. Grill and J. Thomas Mortimer. Electrical properties of implant encapsulation tissue. Annals of Biomedical Engineering, 22(1):23–33, January 1994. URL: https://doi.org/10.1007/bf02368219, doi:10.1007/bf02368219.

[GSTG08]

Yanina Grinberg, Matthew A. Schiefer, Dustin J. Tyler, and Kenneth J. Gustafson. Fascicular perineurium thickness, size, and position affect model predictions of neural excitation. IEEE Transactions on Neural Systems and Rehabilitation Engineering, 16(6):572–581, December 2008. URL: https://doi.org/10.1109/tnsre.2008.2010348, doi:10.1109/tnsre.2008.2010348.

[HMvdW+20]

Charles R. Harris, K. Jarrod Millman, Stéfan J. van der Walt, Ralf Gommers, Pauli Virtanen, David Cournapeau, Eric Wieser, Julian Taylor, Sebastian Berg, Nathaniel J. Smith, Robert Kern, Matti Picus, Stephan Hoyer, Marten H. van Kerkwijk, Matthew Brett, Allan Haldane, Jaime Fernández del Río, Mark Wiebe, Pearu Peterson, Pierre Gérard-Marchant, Kevin Sheppard, Tyler Reddy, Warren Weckesser, Hameer Abbasi, Christoph Gohlke, and Travis E. Oliphant. Array programming with NumPy. Nature, 585(7825):357–362, September 2020. URL: https://doi.org/10.1038/s41586-020-2649-2, doi:10.1038/s41586-020-2649-2.

[HK17]

Kenneth Horch and Daryl Kipke. Neuroprosthetics: Theory And Practice. Series On Bioengineering And Biomedical Engineering. WS Professional, Singapore, Singapore, 2 edition, May 2017.

[Hun07]

J. D. Hunter. Matplotlib: a 2d graphics environment. Computing in Science & Engineering, 9(3):90–95, 2007. doi:10.1109/MCSE.2007.55.

[Hur39]

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[JrB65]

James B. Ranck Jr. and Spencer L. BeMent. The specific impedance of the dorsal columns of cat: an anisotropic medium. Experimental Neurology, 11(4):451–463, April 1965. URL: https://doi.org/10.1016/0014-4886(65)90059-2, doi:10.1016/0014-4886(65)90059-2.

[Kun--]

Ken Kundert. Quantiphy. 2016–. URL: https://pypi.org/project/quantiphy/.

[MGST04]

Cameron C. McIntyre, Warren M. Grill, David L. Sherman, and Nitish V. Thakor. Cellular effects of deep brain stimulation: model-based analysis of activation and inhibition. Journal of Neurophysiology, 91(4):1457–1469, April 2004. URL: https://doi.org/10.1152/jn.00989.2003, doi:10.1152/jn.00989.2003.

[MRG02]

Cameron C. McIntyre, Andrew G. Richardson, and Warren M. Grill. Modeling the excitability of mammalian nerve fibers: influence of afterpotentials on the recovery cycle. Journal of Neurophysiology, 87(2):995–1006, February 2002. URL: https://doi.org/10.1152/jn.00353.2001, doi:10.1152/jn.00353.2001.

[McN--]

John McNamara. Xlsxwriter. 2017–. URL: https://xlsxwriter.readthedocs.io.

[pdt20]

The pandas development team. Pandas-dev/pandas: pandas. February 2020. URL: https://doi.org/10.5281/zenodo.3509134, doi:10.5281/zenodo.3509134.

[PBG17]

N A Pelot, C E Behrend, and W M Grill. Modeling the response of small myelinated axons in a compound nerve to kilohertz frequency signals. Journal of Neural Engineering, 14(4):046022, June 2017. URL: https://doi.org/10.1088/1741-2552/aa6a5f, doi:10.1088/1741-2552/aa6a5f.

[PBG18]

Nicole A Pelot, Christina E Behrend, and Warren M Grill. On the parameters used in finite element modeling of compound peripheral nerves. Journal of Neural Engineering, 16(1):016007, December 2018. URL: https://doi.org/10.1088/1741-2552/aaeb0c, doi:10.1088/1741-2552/aaeb0c.

[PGC+20]

Nicole A. Pelot, Gabriel B. Goldhagen, Jake E. Cariello, Eric D. Musselman, Kara A. Clissold, J. Ashley Ezzell, and Warren M. Grill. Quantified morphology of the cervical and subdiaphragmatic vagus nerves of human, pig, and rat. Frontiers in Neuroscience, November 2020. URL: https://doi.org/10.3389/fnins.2020.601479, doi:10.3389/fnins.2020.601479.

[PTG18]

Nicole A. Pelot, Brandon J. Thio, and Warren M. Grill. Modeling current sources for neural stimulation in COMSOL. Frontiers in Computational Neuroscience, June 2018. URL: https://doi.org/10.3389/fncom.2018.00040, doi:10.3389/fncom.2018.00040.

[PenaPG24]

Edgar Peña, Nicole A Pelot, and Warren M Grill. Computational models of compound nerve action potentials: efficient filter-based methods to quantify effects of tissue conductivities, conduction distance, and nerve fiber parameters. PLOS Computational Biology, 20(3):e1011833, 2024. URL: https://doi.org/10.1371/journal.pcbi.1011833, doi:10.1371/journal.pcbi.1011833.

[RA93]

F. Rattay and M. Aberham. Modeling axon membranes for functional electrical stimulation. IEEE Transactions on Biomedical Engineering, 40(12):1201–1209, 1993. URL: https://doi.org/10.1109/10.250575, doi:10.1109/10.250575.

[Ryd81]

Martin Rydmark. Nodal axon diameter correlates linearly with internodal axon diameter in spinal roots of the cat. Neuroscience letters, 24(3):247–250, 1981. URL: https://doi.org/10.1016/0304-3940(81)90165-8, doi:10.1016/0304-3940(81)90165-8.

[Shi--]

Pete Shinners. Pygame. 2011–. URL: https://www.pygame.org.

[Sto95]

C. Stolinski. Structure and composition of the outer connective tissue sheaths of peripheral nerve. Journal of Anatomy, 186(Pt 1):123, February 1995. Publisher: Wiley-Blackwell. URL: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1167278/ (visited on 2022-06-06).

[SGJ15]

Danielle Sundt, Nikita Gamper, and David B. Jaffe. Spike propagation through the dorsal root ganglia in an unmyelinated sensory neuron: a modeling study. Journal of Neurophysiology, 114(6):3140–3153, December 2015. URL: https://doi.org/10.1152/jn.00226.2015, doi:10.1152/jn.00226.2015.

[TPO+14]

Jenny Tigerholm, Marcus E. Petersson, Otilia Obreja, Angelika Lampert, Richard Carr, Martin Schmelz, and Erik Fransén. Modeling activity-dependent changes of axonal spike conduction in primary afferent c-nociceptors. Journal of Neurophysiology, 111(9):1721–1735, May 2014. URL: https://doi.org/10.1152/jn.00777.2012, doi:10.1152/jn.00777.2012.

[Tom06]

Suramya Tomar. Converting video formats with ffmpeg. Linux Journal, 2006(146):10, 2006.

[VdWSchonbergerNI+14]

Stefan Van der Walt, Johannes L Schönberger, Juan Nunez-Iglesias, François Boulogne, Joshua D Warner, Neil Yager, Emmanuelle Gouillart, and Tony Yu. Scikit-image: image processing in python. PeerJ, 2:e453, 2014.

[VGO+20]

Pauli Virtanen, Ralf Gommers, Travis E. Oliphant, Matt Haberland, Tyler Reddy, David Cournapeau, Evgeni Burovski, Pearu Peterson, Warren Weckesser, Jonathan Bright, Stéfan J. van der Walt, Matthew Brett, Joshua Wilson, K. Jarrod Millman, Nikolay Mayorov, Andrew R. J. Nelson, Eric Jones, Robert Kern, Eric Larson, C J Carey, İlhan Polat, Yu Feng, Eric W. Moore, Jake VanderPlas, Denis Laxalde, Josef Perktold, Robert Cimrman, Ian Henriksen, E. A. Quintero, Charles R. Harris, Anne M. Archibald, Antônio H. Ribeiro, Fabian Pedregosa, Paul van Mulbregt, Aditya Vijaykumar, Alessandro Pietro Bardelli, Alex Rothberg, Andreas Hilboll, Andreas Kloeckner, Anthony Scopatz, Antony Lee, Ariel Rokem, C. Nathan Woods, Chad Fulton, Charles Masson, Christian Häggström, Clark Fitzgerald, David A. Nicholson, David R. Hagen, Dmitrii V. Pasechnik, Emanuele Olivetti, Eric Martin, Eric Wieser, Fabrice Silva, Felix Lenders, Florian Wilhelm, G. Young, Gavin A. Price, Gert-Ludwig Ingold, Gregory E. Allen, Gregory R. Lee, Hervé Audren, Irvin Probst, Jörg P. Dietrich, Jacob Silterra, James T Webber, Janko Slavič, Joel Nothman, Johannes Buchner, Johannes Kulick, Johannes L. Schönberger, José Vin\'ıcius de Miranda Cardoso, Joscha Reimer, Joseph Harrington, Juan Luis Cano Rodr\'ıguez, Juan Nunez-Iglesias, Justin Kuczynski, Kevin Tritz, Martin Thoma, Matthew Newville, Matthias Kümmerer, Maximilian Bolingbroke, Michael Tartre, Mikhail Pak, Nathaniel J. Smith, Nikolai Nowaczyk, Nikolay Shebanov, Oleksandr Pavlyk, Per A. Brodtkorb, Perry Lee, Robert T. McGibbon, Roman Feldbauer, Sam Lewis, Sam Tygier, Scott Sievert, Sebastiano Vigna, Stefan Peterson, Surhud More, Tadeusz Pudlik, Takuya Oshima, Thomas J. Pingel, Thomas P. Robitaille, Thomas Spura, Thouis R. Jones, Tim Cera, Tim Leslie, Tiziano Zito, Tom Krauss, Utkarsh Upadhyay, Yaroslav O. Halchenko, and Yoshiki Vázquez-Baeza and. SciPy 1.0: fundamental algorithms for scientific computing in python. Nature Methods, 17(3):261–272, February 2020. URL: https://doi.org/10.1038/s41592-019-0686-2, doi:10.1038/s41592-019-0686-2.

[Was21]

Michael L. Waskom. Seaborn: statistical data visualization. Journal of Open Source Software, 6(60):3021, 2021. URL: https://doi.org/10.21105/joss.03021, doi:10.21105/joss.03021.

[WSRT84]

A. Weerasuriya, R.A. Spangler, S.I. Rapoport, and R.E. Taylor. AC impedance of the perineurium of the frog sciatic nerve. Biophysical Journal, 46(2):167–174, August 1984. URL: https://doi.org/10.1016/s0006-3495(84)84009-6, doi:10.1016/s0006-3495(84)84009-6.

[WDA+16]

Mark D. Wilkinson, Michel Dumontier, IJsbrand Jan Aalbersberg, Gabrielle Appleton, Myles Axton, Arie Baak, Niklas Blomberg, Jan-Willem Boiten, Luiz Bonino da Silva Santos, Philip E. Bourne, Jildau Bouwman, Anthony J. Brookes, Tim Clark, Mercè Crosas, Ingrid Dillo, Olivier Dumon, Scott Edmunds, Chris T. Evelo, Richard Finkers, Alejandra Gonzalez-Beltran, Alasdair J.G. Gray, Paul Groth, Carole Goble, Jeffrey S. Grethe, Jaap Heringa, Peter A.C 't Hoen, Rob Hooft, Tobias Kuhn, Ruben Kok, Joost Kok, Scott J. Lusher, Maryann E. Martone, Albert Mons, Abel L. Packer, Bengt Persson, Philippe Rocca-Serra, Marco Roos, Rene van Schaik, Susanna-Assunta Sansone, Erik Schultes, Thierry Sengstag, Ted Slater, George Strawn, Morris A. Swertz, Mark Thompson, Johan van der Lei, Erik van Mulligen, Jan Velterop, Andra Waagmeester, Peter Wittenburg, Katherine Wolstencroft, Jun Zhao, and Barend Mons. The FAIR guiding principles for scientific data management and stewardship. Scientific Data, March 2016. URL: https://doi.org/10.1038/sdata.2016.18, doi:10.1038/sdata.2016.18.

[WesMcKinney10]

Wes McKinney. Data Structures for Statistical Computing in Python. In Stéfan van der Walt and Jarrod Millman, editors, Proceedings of the 9th Python in Science Conference, 56 – 61. 2010. doi:10.25080/Majora-92bf1922-00a.